WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F40E10.4.1 Sequence Name  F40E10.4.1
Length (nt)  4577   Chromosome Location  X: 14674328-14683324
Chromosome . Primary Identifier  X Chromosome Location . Start  14674328
Chromosome Location . End  14683324 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F40E10.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004854 slt-1 F40E10.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F40E10.4 F40E10.4 4233   X: 14674375-14674520

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F40E10.4.1 14674328 14683324 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

32 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260724   193   X: 14674328-14674520 Caenorhabditis elegans
Exon260725   72   X: 14674564-14674635 Caenorhabditis elegans
Exon260726   72   X: 14675083-14675154 Caenorhabditis elegans
Exon260727   72   X: 14675198-14675269 Caenorhabditis elegans
Exon260728   99   X: 14675322-14675420 Caenorhabditis elegans
Exon260729   108   X: 14675470-14675577 Caenorhabditis elegans
Exon260730   145   X: 14675646-14675790 Caenorhabditis elegans
Exon260731   161   X: 14675846-14676006 Caenorhabditis elegans
Exon260732   72   X: 14676478-14676549 Caenorhabditis elegans
Exon260733   72   X: 14676602-14676673 Caenorhabditis elegans
Exon260734   380   X: 14676724-14677103 Caenorhabditis elegans
Exon260735   97   X: 14677669-14677765 Caenorhabditis elegans
Exon260736   201   X: 14677815-14678015 Caenorhabditis elegans
Exon260737   72   X: 14678062-14678133 Caenorhabditis elegans
Exon260738   72   X: 14678189-14678260 Caenorhabditis elegans
Exon260739   149   X: 14678309-14678457 Caenorhabditis elegans
Exon260740   208   X: 14678507-14678714 Caenorhabditis elegans
Exon260741   97   X: 14678759-14678855 Caenorhabditis elegans
Exon260744   119   X: 14679465-14679583 Caenorhabditis elegans
Exon260745   156   X: 14679635-14679790 Caenorhabditis elegans
Exon260746   325   X: 14679841-14680165 Caenorhabditis elegans
Exon260747   134   X: 14680211-14680344 Caenorhabditis elegans
Exon260748   94   X: 14680882-14680975 Caenorhabditis elegans
Exon260749   126   X: 14681023-14681148 Caenorhabditis elegans
Exon260750   179   X: 14681193-14681371 Caenorhabditis elegans
Exon260751   125   X: 14681418-14681542 Caenorhabditis elegans
Exon260752   219   X: 14681593-14681811 Caenorhabditis elegans
Exon260753   108   X: 14682366-14682473 Caenorhabditis elegans
Exon260754   102   X: 14682523-14682624 Caenorhabditis elegans
Exon260755   113   X: 14682674-14682786 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F40E10.4.1 14674328 14683324 1

1 Sequence

Length
4577

1 Sequence Ontology Term

Identifier Name Description
transcript