WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C05G5.1.3 Sequence Name  C05G5.1.3
Length (nt)  1626   Chromosome Location  X: 14734442-14739938
Chromosome . Primary Identifier  X Chromosome Location . Start  14734442
Chromosome Location . End  14739938 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C05G5.1.3

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007347 C05G5.1 C05G5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C05G5.1 C05G5.1 1371   X: 14734511-14734635

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C05G5.1.3 14734442 14739938 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon260928   194   X: 14734442-14734635 Caenorhabditis elegans
Exon260933   340   X: 14734698-14735037 Caenorhabditis elegans
Exon260937   173   X: 14735239-14735411 Caenorhabditis elegans
Exon260941   181   X: 14735802-14735982 Caenorhabditis elegans
Exon260945   217   X: 14736033-14736249 Caenorhabditis elegans
Exon260949   83   X: 14736736-14736818 Caenorhabditis elegans
Exon260953   156   X: 14736867-14737022 Caenorhabditis elegans
Exon260957   199   X: 14737280-14737478 Caenorhabditis elegans
Exon260961   83   X: 14739856-14739938 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C05G5.1.3 14734442 14739938 -1

1 Sequence

Length
1626

1 Sequence Ontology Term

Identifier Name Description
transcript