WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y16B4A.2.1 Sequence Name  Y16B4A.2.1
Length (nt)  6625   Chromosome Location  X: 14761924-14771851
Chromosome . Primary Identifier  X Chromosome Location . Start  14761924
Chromosome Location . End  14771851 Method  Coding_transcript
Paste the following link
Quick Links:
SummaryGenomicsOther
 
Quick Links:
SummaryGenomicsOther
 
Lists
This MRNA isn't in any lists. Upload a list.

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y16B4A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012445 Y16B4A.2 Y16B4A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y16B4A.2 Y16B4A.2 6486   X: 14762036-14762407

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:Y16B4A.2.1 14761924 14771851 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

35 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261023   484   X: 14761924-14762407 Caenorhabditis elegans
Exon261024   120   X: 14762452-14762571 Caenorhabditis elegans
Exon261025   112   X: 14762619-14762730 Caenorhabditis elegans
Exon261026   69   X: 14762777-14762845 Caenorhabditis elegans
Exon261027   143   X: 14762892-14763034 Caenorhabditis elegans
Exon261028   120   X: 14763086-14763205 Caenorhabditis elegans
Exon261029   127   X: 14763253-14763379 Caenorhabditis elegans
Exon261030   263   X: 14763426-14763688 Caenorhabditis elegans
Exon261031   90   X: 14763738-14763827 Caenorhabditis elegans
Exon261032   163   X: 14763882-14764044 Caenorhabditis elegans
Exon261033   164   X: 14764093-14764256 Caenorhabditis elegans
Exon261034   210   X: 14764302-14764511 Caenorhabditis elegans
Exon261035   526   X: 14764856-14765381 Caenorhabditis elegans
Exon261036   144   X: 14765429-14765572 Caenorhabditis elegans
Exon261037   92   X: 14765620-14765711 Caenorhabditis elegans
Exon261038   174   X: 14765759-14765932 Caenorhabditis elegans
Exon261039   87   X: 14765983-14766069 Caenorhabditis elegans
Exon261040   645   X: 14766396-14767040 Caenorhabditis elegans
Exon261041   78   X: 14767088-14767165 Caenorhabditis elegans
Exon261042   196   X: 14767222-14767417 Caenorhabditis elegans
Exon261043   143   X: 14767470-14767612 Caenorhabditis elegans
Exon261044   150   X: 14767659-14767808 Caenorhabditis elegans
Exon261045   142   X: 14768145-14768286 Caenorhabditis elegans
Exon261046   92   X: 14768334-14768425 Caenorhabditis elegans
Exon261047   264   X: 14768503-14768766 Caenorhabditis elegans
Exon261048   255   X: 14768818-14769072 Caenorhabditis elegans
Exon261049   177   X: 14769175-14769351 Caenorhabditis elegans
Exon261050   295   X: 14769558-14769852 Caenorhabditis elegans
Exon261051   149   X: 14769899-14770047 Caenorhabditis elegans
Exon261052   82   X: 14770095-14770176 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:Y16B4A.2.1 14761924 14771851 -1

1 Sequence

Length
6625

1 Sequence Ontology Term

Identifier Name Description
transcript