WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F42D1.2 Sequence Name  F42D1.2
Length (nt)  1395   Chromosome Location  X: 14791059-14791166
Chromosome . Primary Identifier  X Chromosome Location . Start  14791059
Chromosome Location . End  14791166
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F42D1.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE10298 TATN-1 51.0 464 Caenorhabditis elegans
 

Other

7 RNAi

WormBase ID
WBRNAi00113315
WBRNAi00047093
WBRNAi00032137
WBRNAi00113086
WBRNAi00113142
WBRNAi00117421
WBRNAi00117425

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F42D1.2 14791059 14791166 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009628 tatn-1 F42D1.2 Caenorhabditis elegans

3 Locations


Feature . Primary Identifier
Start End Strand
CDS:F42D1.2 14791059 14791166 1
CDS:F42D1.2 14791300 14792385 1
CDS:F42D1.2 14792443 14792643 1

1 Sequence

Length
1395

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F42D1.2.1 F42D1.2.1 1787   X: 14791008-14792984