WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C27C12.5.1 Sequence Name  C27C12.5.1
Length (nt)  1608   Chromosome Location  X: 14849275-14852631
Chromosome . Primary Identifier  X Chromosome Location . Start  14849275
Chromosome Location . End  14852631 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C27C12.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007775 acd-3 C27C12.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C27C12.5 C27C12.5 1455   X: 14849339-14849464

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C27C12.5.1 14849275 14852631 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261197   190   X: 14849275-14849464 Caenorhabditis elegans
Exon261198   87   X: 14850067-14850153 Caenorhabditis elegans
Exon261199   121   X: 14850208-14850328 Caenorhabditis elegans
Exon261200   97   X: 14850372-14850468 Caenorhabditis elegans
Exon261201   173   X: 14850512-14850684 Caenorhabditis elegans
Exon261202   110   X: 14850738-14850847 Caenorhabditis elegans
Exon261203   110   X: 14851232-14851341 Caenorhabditis elegans
Exon261204   77   X: 14851388-14851464 Caenorhabditis elegans
Exon261205   88   X: 14851518-14851605 Caenorhabditis elegans
Exon261206   86   X: 14851653-14851738 Caenorhabditis elegans
Exon261207   196   X: 14852071-14852266 Caenorhabditis elegans
Exon261208   115   X: 14852317-14852431 Caenorhabditis elegans
Exon261209   158   X: 14852474-14852631 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C27C12.5.1 14849275 14852631 1

1 Sequence

Length
1608

1 Sequence Ontology Term

Identifier Name Description
transcript