WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F14F4.3.1 Sequence Name  F14F4.3.1
Length (nt)  4724   Chromosome Location  X: 14938502-14946317
Chromosome . Primary Identifier  X Chromosome Location . Start  14938502
Chromosome Location . End  14946317 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F14F4.3.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003411 mrp-5 F14F4.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F14F4.3 F14F4.3 4284   X: 14938942-14939171

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F14F4.3.1 14938502 14946317 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

20 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261342   670   X: 14938502-14939171 Caenorhabditis elegans
Exon261343   172   X: 14939417-14939588 Caenorhabditis elegans
Exon261344   609   X: 14939639-14940247 Caenorhabditis elegans
Exon261345   391   X: 14940306-14940696 Caenorhabditis elegans
Exon261346   169   X: 14940742-14940910 Caenorhabditis elegans
Exon261347   130   X: 14941460-14941589 Caenorhabditis elegans
Exon261348   147   X: 14941635-14941781 Caenorhabditis elegans
Exon261349   133   X: 14941834-14941966 Caenorhabditis elegans
Exon261350   296   X: 14942012-14942307 Caenorhabditis elegans
Exon261351   81   X: 14942805-14942885 Caenorhabditis elegans
Exon261352   324   X: 14942931-14943254 Caenorhabditis elegans
Exon261353   170   X: 14943304-14943473 Caenorhabditis elegans
Exon261354   366   X: 14943526-14943891 Caenorhabditis elegans
Exon261355   148   X: 14943937-14944084 Caenorhabditis elegans
Exon261356   265   X: 14944144-14944408 Caenorhabditis elegans
Exon261357   234   X: 14944453-14944686 Caenorhabditis elegans
Exon261358   72   X: 14944736-14944807 Caenorhabditis elegans
Exon261359   165   X: 14944860-14945024 Caenorhabditis elegans
Exon261360   105   X: 14946066-14946170 Caenorhabditis elegans
Exon261361   77   X: 14946241-14946317 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F14F4.3.1 14938502 14946317 -1

1 Sequence

Length
4724

1 Sequence Ontology Term

Identifier Name Description
transcript