WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F45B8.4.1 Sequence Name  F45B8.4.1
Length (nt)  1586   Chromosome Location  X: 14950752-14954648
Chromosome . Primary Identifier  X Chromosome Location . Start  14950752
Chromosome Location . End  14954648 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F45B8.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003909 pag-3 F45B8.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F45B8.4 F45B8.4 1011   X: 14951200-14951299

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F45B8.4.1 14950752 14954648 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261363   548   X: 14950752-14951299 Caenorhabditis elegans
Exon261364   106   X: 14951351-14951456 Caenorhabditis elegans
Exon261365   97   X: 14951580-14951676 Caenorhabditis elegans
Exon261366   92   X: 14951727-14951818 Caenorhabditis elegans
Exon261368   122   X: 14953658-14953779 Caenorhabditis elegans
Exon261369   68   X: 14953838-14953905 Caenorhabditis elegans
Exon261370   98   X: 14953955-14954052 Caenorhabditis elegans
Exon261371   135   X: 14954103-14954237 Caenorhabditis elegans
Exon261372   111   X: 14954283-14954393 Caenorhabditis elegans
Exon261373   209   X: 14954440-14954648 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F45B8.4.1 14950752 14954648 -1

1 Sequence

Length
1586

1 Sequence Ontology Term

Identifier Name Description
transcript