WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T02E1.2.1 Sequence Name  T02E1.2.1
Length (nt)  2031   Chromosome Location  I: 8219998-8223009
Chromosome . Primary Identifier  I Chromosome Location . Start  8219998
Chromosome Location . End  8223009 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T02E1.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00011375 T02E1.2 T02E1.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T02E1.2 T02E1.2 1707   I: 8220314-8220397

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T02E1.2.1 8219998 8223009 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21410   400   I: 8219998-8220397 Caenorhabditis elegans
Exon21411   282   I: 8220493-8220774 Caenorhabditis elegans
Exon21413   229   I: 8221146-8221374 Caenorhabditis elegans
Exon21415   177   I: 8221435-8221611 Caenorhabditis elegans
Exon21417   201   I: 8221660-8221860 Caenorhabditis elegans
Exon21419   181   I: 8221970-8222150 Caenorhabditis elegans
Exon21421   89   I: 8222234-8222322 Caenorhabditis elegans
Exon21423   189   I: 8222396-8222584 Caenorhabditis elegans
Exon21425   80   I: 8222635-8222714 Caenorhabditis elegans
Exon21427   60   I: 8222763-8222822 Caenorhabditis elegans
Exon21429   143   I: 8222867-8223009 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T02E1.2.1 8219998 8223009 -1

1 Sequence

Length
2031

1 Sequence Ontology Term

Identifier Name Description
transcript