WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1c.1 Sequence Name  R07D5.1c.1
Length (nt)  2627   Chromosome Location  X: 15120885-15142395
Chromosome . Primary Identifier  X Chromosome Location . Start  15120885
Chromosome Location . End  15142395 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1c R07D5.1c 1209   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1c.1 15120885 15142395 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261678   1086   X: 15120885-15121970 Caenorhabditis elegans
Exon261687   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261698   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261709   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261720   113   X: 15123414-15123526 Caenorhabditis elegans
Exon261731   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261742   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261753   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261765   51   X: 15127125-15127175 Caenorhabditis elegans
Exon261787   316   X: 15142080-15142395 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1c.1 15120885 15142395 -1

1 Sequence

Length
2627

1 Sequence Ontology Term

Identifier Name Description
transcript