WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1b.1 Sequence Name  R07D5.1b.1
Length (nt)  1365   Chromosome Location  X: 15121822-15125448
Chromosome . Primary Identifier  X Chromosome Location . Start  15121822
Chromosome Location . End  15125448 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1b R07D5.1b 1365   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1b.1 15121822 15125448 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

9 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261679   149   X: 15121822-15121970 Caenorhabditis elegans
Exon261686   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261697   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261708   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261719   113   X: 15123414-15123526 Caenorhabditis elegans
Exon261730   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261741   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261752   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261761   42   X: 15125407-15125448 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1b.1 15121822 15125448 -1

1 Sequence

Length
1365

1 Sequence Ontology Term

Identifier Name Description
transcript