WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1h.1 Sequence Name  R07D5.1h.1
Length (nt)  1431   Chromosome Location  X: 15121822-15131809
Chromosome . Primary Identifier  X Chromosome Location . Start  15121822
Chromosome Location . End  15131809 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1h.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1h R07D5.1h 1431   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1h.1 15121822 15131809 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261681   149   X: 15121822-15121970 Caenorhabditis elegans
Exon261692   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261703   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261714   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261723   113   X: 15123414-15123526 Caenorhabditis elegans
Exon261736   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261747   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261758   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261770   51   X: 15127125-15127175 Caenorhabditis elegans
Exon261779   57   X: 15131753-15131809 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1h.1 15121822 15131809 -1

1 Sequence

Length
1431

1 Sequence Ontology Term

Identifier Name Description
transcript