WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1f.1 Sequence Name  R07D5.1f.1
Length (nt)  1392   Chromosome Location  X: 15121822-15134595
Chromosome . Primary Identifier  X Chromosome Location . Start  15121822
Chromosome Location . End  15134595 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1f R07D5.1f 1392   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1f.1 15121822 15134595 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261682   149   X: 15121822-15121970 Caenorhabditis elegans
Exon261690   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261701   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261712   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261722   113   X: 15123414-15123526 Caenorhabditis elegans
Exon261734   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261745   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261756   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261768   51   X: 15127125-15127175 Caenorhabditis elegans
Exon261781   18   X: 15134578-15134595 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1f.1 15121822 15134595 -1

1 Sequence

Length
1392

1 Sequence Ontology Term

Identifier Name Description
transcript