WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:R07D5.1e.1 Sequence Name  R07D5.1e.1
Length (nt)  2595   Chromosome Location  X: 15120862-15142346
Chromosome . Primary Identifier  X Chromosome Location . Start  15120862
Chromosome Location . End  15142346 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
R07D5.1e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006747 unc-7 R07D5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:R07D5.1e R07D5.1e 1635   X: 15121822-15121970

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1e.1 15120862 15142346 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon261736   1109   X: 15120862-15121970 Caenorhabditis elegans
Exon261750   112   X: 15122604-15122715 Caenorhabditis elegans
Exon261761   168   X: 15122871-15123038 Caenorhabditis elegans
Exon261772   279   X: 15123085-15123363 Caenorhabditis elegans
Exon261785   107   X: 15123420-15123526 Caenorhabditis elegans
Exon261794   288   X: 15124586-15124873 Caenorhabditis elegans
Exon261805   138   X: 15124919-15125056 Caenorhabditis elegans
Exon261816   76   X: 15125112-15125187 Caenorhabditis elegans
Exon261828   51   X: 15127125-15127175 Caenorhabditis elegans
Exon261847   267   X: 15142080-15142346 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:R07D5.1e.1 15120862 15142346 -1

1 Sequence

Length
2595

1 Sequence Ontology Term

Identifier Name Description
transcript