WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F52B5.5b.2 Sequence Name  F52B5.5b.2
Length (nt)  2103   Chromosome Location  I: 8324286-8328854
Chromosome . Primary Identifier  I Chromosome Location . Start  8324286
Chromosome Location . End  8328854 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.5b.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000467 cep-1 F52B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52B5.5b F52B5.5b 594   I: 8327647-8327676

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.5b.2 8324286 8328854 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21672   55   I: 8324286-8324340 Caenorhabditis elegans
Exon21677   80   I: 8324392-8324471 Caenorhabditis elegans
Exon21681   74   I: 8324524-8324597 Caenorhabditis elegans
Exon21685   163   I: 8324649-8324811 Caenorhabditis elegans
Exon21688   99   I: 8324931-8325029 Caenorhabditis elegans
Exon21693   161   I: 8325074-8325234 Caenorhabditis elegans
Exon21697   238   I: 8325460-8325697 Caenorhabditis elegans
Exon21700   166   I: 8326199-8326364 Caenorhabditis elegans
Exon21703   142   I: 8326809-8326950 Caenorhabditis elegans
Exon21706   214   I: 8327463-8327676 Caenorhabditis elegans
Exon21712   237   I: 8328031-8328267 Caenorhabditis elegans
Exon21717   122   I: 8328333-8328454 Caenorhabditis elegans
Exon21723   352   I: 8328503-8328854 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.5b.2 8324286 8328854 1

1 Sequence

Length
2103

1 Sequence Ontology Term

Identifier Name Description
transcript