WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

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mRNA :

WormMine ID  Transcript:F52B5.5b.4 Sequence Name  F52B5.5b.4
Length (nt)  2819   Chromosome Location  I: 8324288-8328852
Chromosome . Primary Identifier  I Chromosome Location . Start  8324288
Chromosome Location . End  8328852 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F52B5.5b.4

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000467 cep-1 F52B5.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F52B5.5b F52B5.5b 594   I: 8327647-8327676

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.5b.4 8324288 8328852 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon21674   53   I: 8324288-8324340 Caenorhabditis elegans
Exon21679   80   I: 8324392-8324471 Caenorhabditis elegans
Exon21683   74   I: 8324524-8324597 Caenorhabditis elegans
Exon21687   163   I: 8324649-8324811 Caenorhabditis elegans
Exon21691   93   I: 8324937-8325029 Caenorhabditis elegans
Exon21695   1291   I: 8325074-8326364 Caenorhabditis elegans
Exon21704   142   I: 8326809-8326950 Caenorhabditis elegans
Exon21708   214   I: 8327463-8327676 Caenorhabditis elegans
Exon21714   237   I: 8328031-8328267 Caenorhabditis elegans
Exon21719   122   I: 8328333-8328454 Caenorhabditis elegans
Exon21721   350   I: 8328503-8328852 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F52B5.5b.4 8324288 8328852 1

1 Sequence

Length
2819

1 Sequence Ontology Term

Identifier Name Description
transcript