WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F39B1.1 Sequence Name  F39B1.1
Length (nt)  4824   Chromosome Location  X: 15235122-15235319
Chromosome . Primary Identifier  X Chromosome Location . Start  15235122
Chromosome Location . End  15235319
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F39B1.1

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE05832 PIKI-1 185.3 1607 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00046751
WBRNAi00014591
WBRNAi00031974
WBRNAi00065088
WBRNAi00065087
WBRNAi00092314
WBRNAi00092313
WBRNAi00092315
WBRNAi00087661
WBRNAi00023459

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F39B1.1 15235122 15235319 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009552 piki-1 F39B1.1 Caenorhabditis elegans

23 Locations


Feature . Primary Identifier
Start End Strand
CDS:F39B1.1 15235122 15235319 -1
CDS:F39B1.1 15235396 15235541 -1
CDS:F39B1.1 15235596 15235746 -1
CDS:F39B1.1 15237608 15237743 -1
CDS:F39B1.1 15237794 15237894 -1
CDS:F39B1.1 15237945 15238020 -1
CDS:F39B1.1 15238228 15238472 -1
CDS:F39B1.1 15238524 15238680 -1
CDS:F39B1.1 15238731 15239167 -1
CDS:F39B1.1 15239413 15239998 -1
CDS:F39B1.1 15240084 15240530 -1
CDS:F39B1.1 15240577 15240737 -1
CDS:F39B1.1 15240788 15241236 -1
CDS:F39B1.1 15241662 15241780 -1
CDS:F39B1.1 15241833 15241996 -1
CDS:F39B1.1 15242262 15242391 -1
CDS:F39B1.1 15243611 15243839 -1
CDS:F39B1.1 15243884 15243992 -1
CDS:F39B1.1 15244873 15245087 -1
CDS:F39B1.1 15245294 15245461 -1
CDS:F39B1.1 15245592 15245797 -1
CDS:F39B1.1 15246072 15246221 -1
CDS:F39B1.1 15246322 15246365 -1

1 Sequence

Length
4824

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F39B1.1.1 F39B1.1.1 5290   X: 15234690-15246399