WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02D4.2b.1 Sequence Name  C02D4.2b.1
Length (nt)  2087   Chromosome Location  X: 15286533-15298708
Chromosome . Primary Identifier  X Chromosome Location . Start  15286533
Chromosome Location . End  15298708 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02D4.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004777 ser-2 C02D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02D4.2b C02D4.2b 1290   X: 15286845-15287003

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.2b.1 15286533 15298708 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262106   471   X: 15286533-15287003 Caenorhabditis elegans
Exon262112   174   X: 15287755-15287928 Caenorhabditis elegans
Exon262117   105   X: 15288089-15288193 Caenorhabditis elegans
Exon262123   104   X: 15288742-15288845 Caenorhabditis elegans
Exon262127   113   X: 15289350-15289462 Caenorhabditis elegans
Exon262132   101   X: 15289732-15289832 Caenorhabditis elegans
Exon262139   76   X: 15290067-15290142 Caenorhabditis elegans
Exon262146   106   X: 15290202-15290307 Caenorhabditis elegans
Exon262155   166   X: 15290984-15291149 Caenorhabditis elegans
Exon262162   165   X: 15291781-15291945 Caenorhabditis elegans
Exon262178   506   X: 15298203-15298708 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.2b.1 15286533 15298708 -1

1 Sequence

Length
2087

1 Sequence Ontology Term

Identifier Name Description
transcript