WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02D4.2f.1 Sequence Name  C02D4.2f.1
Length (nt)  1384   Chromosome Location  X: 15286845-15292060
Chromosome . Primary Identifier  X Chromosome Location . Start  15286845
Chromosome Location . End  15292060 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02D4.2f.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004777 ser-2 C02D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02D4.2f C02D4.2f 1266   X: 15286845-15287003

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.2f.1 15286845 15292060 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262109   159   X: 15286845-15287003 Caenorhabditis elegans
Exon262114   174   X: 15287755-15287928 Caenorhabditis elegans
Exon262119   105   X: 15288089-15288193 Caenorhabditis elegans
Exon262124   104   X: 15288742-15288845 Caenorhabditis elegans
Exon262129   113   X: 15289350-15289462 Caenorhabditis elegans
Exon262134   101   X: 15289732-15289832 Caenorhabditis elegans
Exon262143   76   X: 15290067-15290142 Caenorhabditis elegans
Exon262150   106   X: 15290202-15290307 Caenorhabditis elegans
Exon262159   166   X: 15290984-15291149 Caenorhabditis elegans
Exon262167   280   X: 15291781-15292060 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.2f.1 15286845 15292060 -1

1 Sequence

Length
1384

1 Sequence Ontology Term

Identifier Name Description
transcript