WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C02D4.2e.1 Sequence Name  C02D4.2e.1
Length (nt)  1368   Chromosome Location  X: 15286845-15294871
Chromosome . Primary Identifier  X Chromosome Location . Start  15286845
Chromosome Location . End  15294871 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C02D4.2e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004777 ser-2 C02D4.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C02D4.2e C02D4.2e 1368   X: 15286845-15287003

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.2e.1 15286845 15294871 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262110   159   X: 15286845-15287003 Caenorhabditis elegans
Exon262113   174   X: 15287755-15287928 Caenorhabditis elegans
Exon262118   105   X: 15288089-15288193 Caenorhabditis elegans
Exon262120   173   X: 15288673-15288845 Caenorhabditis elegans
Exon262128   113   X: 15289350-15289462 Caenorhabditis elegans
Exon262133   101   X: 15289732-15289832 Caenorhabditis elegans
Exon262142   76   X: 15290067-15290142 Caenorhabditis elegans
Exon262149   106   X: 15290202-15290307 Caenorhabditis elegans
Exon262158   166   X: 15290984-15291149 Caenorhabditis elegans
Exon262165   165   X: 15291781-15291945 Caenorhabditis elegans
Exon262171   30   X: 15294842-15294871 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C02D4.2e.1 15286845 15294871 -1

1 Sequence

Length
1368

1 Sequence Ontology Term

Identifier Name Description
transcript