WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H13N06.4b.1 Sequence Name  H13N06.4b.1
Length (nt)  2004   Chromosome Location  X: 15497555-15500281
Chromosome . Primary Identifier  X Chromosome Location . Start  15497555
Chromosome Location . End  15500281 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H13N06.4b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010397 suox-1 H13N06.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H13N06.4b H13N06.4b 537   X: 15497556-15497667

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.4b.1 15497555 15500281 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

7 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262508   113   X: 15497555-15497667 Caenorhabditis elegans
Exon262512   197   X: 15497715-15497911 Caenorhabditis elegans
Exon262516   180   X: 15498342-15498521 Caenorhabditis elegans
Exon262521   566   X: 15498607-15499172 Caenorhabditis elegans
Exon262527   211   X: 15499220-15499430 Caenorhabditis elegans
Exon262531   91   X: 15499502-15499592 Caenorhabditis elegans
Exon262537   646   X: 15499636-15500281 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H13N06.4b.1 15497555 15500281 1

1 Sequence

Length
2004

1 Sequence Ontology Term

Identifier Name Description
transcript