WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H13N06.4b Sequence Name  H13N06.4b
Length (nt)  537   Chromosome Location  X: 15497556-15497667
Chromosome . Primary Identifier  X Chromosome Location . Start  15497556
Chromosome Location . End  15497667
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H13N06.4b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE38383 SUOX-1, isoform b 20.3 178 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001187
WBRNAi00049394
WBRNAi00033706

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H13N06.4b 15497556 15497667 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00010397 suox-1 H13N06.4 Caenorhabditis elegans

4 Locations


Feature . Primary Identifier
Start End Strand
CDS:H13N06.4b 15497556 15497667 1
CDS:H13N06.4b 15497715 15497911 1
CDS:H13N06.4b 15498342 15498521 1
CDS:H13N06.4b 15498607 15498654 1

1 Sequence

Length
537

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H13N06.4b.2 H13N06.4b.2 1875   X: 15497555-15500207
Transcript:H13N06.4b.1 H13N06.4b.1 2004   X: 15497555-15500281