WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H30A04.1a.2 Sequence Name  H30A04.1a.2
Length (nt)  3313   Chromosome Location  X: 15510011-15524029
Chromosome . Primary Identifier  X Chromosome Location . Start  15510011
Chromosome Location . End  15524029 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H30A04.1a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001148 eat-20 H30A04.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H30A04.1a H30A04.1a 2427   X: 15516757-15516790

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H30A04.1a.2 15510011 15524029 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

15 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262578   50   X: 15510011-15510060 Caenorhabditis elegans
Exon262585   136   X: 15516655-15516790 Caenorhabditis elegans
Exon262589   136   X: 15516852-15516987 Caenorhabditis elegans
Exon262593   86   X: 15517238-15517323 Caenorhabditis elegans
Exon262597   153   X: 15517381-15517533 Caenorhabditis elegans
Exon262601   150   X: 15517886-15518035 Caenorhabditis elegans
Exon262606   53   X: 15518360-15518412 Caenorhabditis elegans
Exon262610   270   X: 15518833-15519102 Caenorhabditis elegans
Exon262614   143   X: 15519252-15519394 Caenorhabditis elegans
Exon262620   128   X: 15520950-15521077 Caenorhabditis elegans
Exon262624   123   X: 15521137-15521259 Caenorhabditis elegans
Exon262628   99   X: 15521512-15521610 Caenorhabditis elegans
Exon262632   756   X: 15521663-15522418 Caenorhabditis elegans
Exon262638   132   X: 15522932-15523063 Caenorhabditis elegans
Exon262641   898   X: 15523132-15524029 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H30A04.1a.2 15510011 15524029 1

1 Sequence

Length
3313

1 Sequence Ontology Term

Identifier Name Description
transcript