WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:H30A04.1a Sequence Name  H30A04.1a
Length (nt)  2427   Chromosome Location  X: 15516757-15516790
Chromosome . Primary Identifier  X Chromosome Location . Start  15516757
Chromosome Location . End  15516790
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H30A04.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE18828 EAT-20, isoform a 87.7 808 Caenorhabditis elegans
 

Other

13 RNAi

WormBase ID
WBRNAi00089865
WBRNAi00049519
WBRNAi00049520
WBRNAi00016334
WBRNAi00033767
WBRNAi00092901
WBRNAi00089880
WBRNAi00090040
WBRNAi00090198
WBRNAi00090361
WBRNAi00090408
WBRNAi00090455
WBRNAi00090502

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:H30A04.1a 15516757 15516790 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001148 eat-20 H30A04.1 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:H30A04.1a 15516757 15516790 1
CDS:H30A04.1a 15516852 15516987 1
CDS:H30A04.1a 15517238 15517323 1
CDS:H30A04.1a 15517381 15517533 1
CDS:H30A04.1a 15517886 15518035 1
CDS:H30A04.1a 15518360 15518412 1
CDS:H30A04.1a 15518833 15519102 1
CDS:H30A04.1a 15519252 15519394 1
CDS:H30A04.1a 15520950 15521077 1
CDS:H30A04.1a 15521137 15521259 1
CDS:H30A04.1a 15521512 15521610 1
CDS:H30A04.1a 15521663 15522418 1
CDS:H30A04.1a 15522932 15523063 1
CDS:H30A04.1a 15523132 15523295 1

1 Sequence

Length
2427

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:H30A04.1a.2 H30A04.1a.2 3313   X: 15510011-15524029
Transcript:H30A04.1a.1 H30A04.1a.1 3261   X: 15516655-15524027