WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:H30A04.1a.1 Sequence Name  H30A04.1a.1
Length (nt)  3261   Chromosome Location  X: 15516655-15524027
Chromosome . Primary Identifier  X Chromosome Location . Start  15516655
Chromosome Location . End  15524027 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
H30A04.1a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001148 eat-20 H30A04.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:H30A04.1a H30A04.1a 2427   X: 15516757-15516790

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:H30A04.1a.1 15516655 15524027 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon262586   136   X: 15516655-15516790 Caenorhabditis elegans
Exon262588   136   X: 15516852-15516987 Caenorhabditis elegans
Exon262592   86   X: 15517238-15517323 Caenorhabditis elegans
Exon262596   153   X: 15517381-15517533 Caenorhabditis elegans
Exon262600   150   X: 15517886-15518035 Caenorhabditis elegans
Exon262605   53   X: 15518360-15518412 Caenorhabditis elegans
Exon262609   270   X: 15518833-15519102 Caenorhabditis elegans
Exon262613   143   X: 15519252-15519394 Caenorhabditis elegans
Exon262619   128   X: 15520950-15521077 Caenorhabditis elegans
Exon262623   123   X: 15521137-15521259 Caenorhabditis elegans
Exon262627   99   X: 15521512-15521610 Caenorhabditis elegans
Exon262631   756   X: 15521663-15522418 Caenorhabditis elegans
Exon262637   132   X: 15522932-15523063 Caenorhabditis elegans
Exon262640   896   X: 15523132-15524027 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:H30A04.1a.1 15516655 15524027 1

1 Sequence

Length
3261

1 Sequence Ontology Term

Identifier Name Description
transcript