WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK678.5.1 Sequence Name  ZK678.5.1
Length (nt)  1890   Chromosome Location  X: 15752257-15757269
Chromosome . Primary Identifier  X Chromosome Location . Start  15752257
Chromosome Location . End  15757269 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK678.5.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006950 wrt-4 ZK678.5 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK678.5 ZK678.5 1674   X: 15752468-15752605

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK678.5.1 15752257 15757269 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263229   349   X: 15752257-15752605 Caenorhabditis elegans
Exon263230   165   X: 15752654-15752818 Caenorhabditis elegans
Exon263231   163   X: 15752877-15753039 Caenorhabditis elegans
Exon263232   184   X: 15753087-15753270 Caenorhabditis elegans
Exon263233   52   X: 15753315-15753366 Caenorhabditis elegans
Exon263234   341   X: 15754457-15754797 Caenorhabditis elegans
Exon263235   239   X: 15754885-15755123 Caenorhabditis elegans
Exon263236   95   X: 15755836-15755930 Caenorhabditis elegans
Exon263237   198   X: 15756087-15756284 Caenorhabditis elegans
Exon263238   104   X: 15757166-15757269 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK678.5.1 15752257 15757269 -1

1 Sequence

Length
1890

1 Sequence Ontology Term

Identifier Name Description
transcript