WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y7A5A.2.1 Sequence Name  Y7A5A.2.1
Length (nt)  550   Chromosome Location  X: 15771708-15772735
Chromosome . Primary Identifier  X Chromosome Location . Start  15771708
Chromosome Location . End  15772735 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y7A5A.2.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012408 Y7A5A.2 Y7A5A.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y7A5A.2 Y7A5A.2 435   X: 15771817-15771903

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y7A5A.2.1 15771708 15772735 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

4 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263257   196   X: 15771708-15771903 Caenorhabditis elegans
Exon263258   111   X: 15771960-15772070 Caenorhabditis elegans
Exon263259   135   X: 15772441-15772575 Caenorhabditis elegans
Exon263260   108   X: 15772628-15772735 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y7A5A.2.1 15771708 15772735 -1

1 Sequence

Length
550

1 Sequence Ontology Term

Identifier Name Description
transcript