WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DY3.4a.2 Sequence Name  DY3.4a.2
Length (nt)  1851   Chromosome Location  I: 8765745-8771251
Chromosome . Primary Identifier  I Chromosome Location . Start  8765745
Chromosome Location . End  8771251 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DY3.4a.2

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006618 trt-1 DY3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DY3.4a DY3.4a 1686   I: 8768521-8768652

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DY3.4a.2 8765745 8771251 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

11 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23179   95   I: 8765745-8765839 Caenorhabditis elegans
Exon23184   132   I: 8768521-8768652 Caenorhabditis elegans
Exon23191   185   I: 8768738-8768922 Caenorhabditis elegans
Exon23194   173   I: 8768971-8769143 Caenorhabditis elegans
Exon23199   257   I: 8769200-8769456 Caenorhabditis elegans
Exon23204   169   I: 8769699-8769867 Caenorhabditis elegans
Exon23209   154   I: 8769909-8770062 Caenorhabditis elegans
Exon23214   157   I: 8770108-8770264 Caenorhabditis elegans
Exon23219   258   I: 8770599-8770856 Caenorhabditis elegans
Exon23224   66   I: 8770934-8770999 Caenorhabditis elegans
Exon23231   205   I: 8771047-8771251 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DY3.4a.2 8765745 8771251 1

1 Sequence

Length
1851

1 Sequence Ontology Term

Identifier Name Description
transcript