WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:DY3.4a.1 Sequence Name  DY3.4a.1
Length (nt)  1753   Chromosome Location  I: 8768521-8771248
Chromosome . Primary Identifier  I Chromosome Location . Start  8768521
Chromosome Location . End  8771248 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
DY3.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006618 trt-1 DY3.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:DY3.4a DY3.4a 1686   I: 8768521-8768652

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:DY3.4a.1 8768521 8771248 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23187   132   I: 8768521-8768652 Caenorhabditis elegans
Exon23190   185   I: 8768738-8768922 Caenorhabditis elegans
Exon23193   173   I: 8768971-8769143 Caenorhabditis elegans
Exon23198   257   I: 8769200-8769456 Caenorhabditis elegans
Exon23203   169   I: 8769699-8769867 Caenorhabditis elegans
Exon23208   154   I: 8769909-8770062 Caenorhabditis elegans
Exon23213   157   I: 8770108-8770264 Caenorhabditis elegans
Exon23218   258   I: 8770599-8770856 Caenorhabditis elegans
Exon23223   66   I: 8770934-8770999 Caenorhabditis elegans
Exon23230   202   I: 8771047-8771248 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:DY3.4a.1 8768521 8771248 1

1 Sequence

Length
1753

1 Sequence Ontology Term

Identifier Name Description
transcript