WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C09G1.4.1 Sequence Name  C09G1.4.1
Length (nt)  2010   Chromosome Location  X: 15987971-15996937
Chromosome . Primary Identifier  X Chromosome Location . Start  15987971
Chromosome Location . End  15996937 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C09G1.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00007486 C09G1.4 C09G1.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C09G1.4 C09G1.4 1638   X: 15988327-15988517

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C09G1.4.1 15987971 15996937 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon263538   547   X: 15987971-15988517 Caenorhabditis elegans
Exon263539   128   X: 15989880-15990007 Caenorhabditis elegans
Exon263541   162   X: 15990285-15990446 Caenorhabditis elegans
Exon263543   137   X: 15990522-15990658 Caenorhabditis elegans
Exon263545   244   X: 15991359-15991602 Caenorhabditis elegans
Exon263547   121   X: 15991651-15991771 Caenorhabditis elegans
Exon263549   153   X: 15992204-15992356 Caenorhabditis elegans
Exon263551   270   X: 15992844-15993113 Caenorhabditis elegans
Exon263553   150   X: 15993582-15993731 Caenorhabditis elegans
Exon263557   98   X: 15996840-15996937 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C09G1.4.1 15987971 15996937 -1

1 Sequence

Length
2010

1 Sequence Ontology Term

Identifier Name Description
transcript