WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F53B6.2b.1 Sequence Name  F53B6.2b.1
Length (nt)  2360   Chromosome Location  I: 8931037-8937651
Chromosome . Primary Identifier  I Chromosome Location . Start  8931037
Chromosome Location . End  8937651 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F53B6.2b.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00009958 madd-4 F53B6.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F53B6.2b F53B6.2b 2136   I: 8931163-8931232

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F53B6.2b.1 8931037 8937651 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

10 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon23757   196   I: 8931037-8931232 Caenorhabditis elegans
Exon23760   55   I: 8931386-8931440 Caenorhabditis elegans
Exon23763   225   I: 8931964-8932188 Caenorhabditis elegans
Exon23766   295   I: 8932261-8932555 Caenorhabditis elegans
Exon23769   258   I: 8932784-8933041 Caenorhabditis elegans
Exon23772   501   I: 8933097-8933597 Caenorhabditis elegans
Exon23775   470   I: 8933711-8934180 Caenorhabditis elegans
Exon23778   131   I: 8934439-8934569 Caenorhabditis elegans
Exon23781   81   I: 8934997-8935077 Caenorhabditis elegans
Exon23783   148   I: 8937504-8937651 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F53B6.2b.1 8931037 8937651 -1

1 Sequence

Length
2360

1 Sequence Ontology Term

Identifier Name Description
transcript