WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F01G12.5b Sequence Name  F01G12.5b
Length (nt)  5280   Chromosome Location  X: 16381022-16381114
Chromosome . Primary Identifier  X Chromosome Location . Start  16381022
Chromosome Location . End  16381114
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F01G12.5b

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE04335 LET-2, isoform b 167.8 1759 Caenorhabditis elegans
 

Other

10 RNAi

WormBase ID
WBRNAi00043776
WBRNAi00025000
WBRNAi00027255
WBRNAi00001670
WBRNAi00012754
WBRNAi00001036
WBRNAi00065710
WBRNAi00066751
WBRNAi00087194
WBRNAi00066565

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F01G12.5b 16381022 16381114 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002280 let-2 F01G12.5 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F01G12.5b 16381022 16381114 -1
CDS:F01G12.5b 16381173 16381636 -1
CDS:F01G12.5b 16381719 16382510 -1
CDS:F01G12.5b 16382564 16382795 -1
CDS:F01G12.5b 16382841 16383655 -1
CDS:F01G12.5b 16383933 16384605 -1
CDS:F01G12.5b 16384658 16385519 -1
CDS:F01G12.5b 16385567 16385838 -1
CDS:F01G12.5b 16385888 16386052 -1
CDS:F01G12.5b 16386099 16386215 -1
CDS:F01G12.5b 16386613 16386723 -1
CDS:F01G12.5b 16386982 16387059 -1
CDS:F01G12.5b 16387111 16387286 -1
CDS:F01G12.5b 16387788 16387976 -1
CDS:F01G12.5b 16388299 16388398 -1
CDS:F01G12.5b 16388773 16388835 -1
CDS:F01G12.5b 16389033 16389087 -1
CDS:F01G12.5b 16389305 16389327 -1

1 Sequence

Length
5280

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F01G12.5b.1 F01G12.5b.1 5280   X: 16381022-16389327