WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:W10D5.3c.1 Sequence Name  W10D5.3c.1
Length (nt)  2715   Chromosome Location  I: 9100846-9107582
Chromosome . Primary Identifier  I Chromosome Location . Start  9100846
Chromosome Location . End  9107582 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D5.3c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:W10D5.3c W10D5.3c 2343   I: 9101175-9101233

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3c.1 9100846 9107582 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

14 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24181   388   I: 9100846-9101233 Caenorhabditis elegans
Exon24190   166   I: 9101838-9102003 Caenorhabditis elegans
Exon24199   138   I: 9102265-9102402 Caenorhabditis elegans
Exon24205   257   I: 9102641-9102897 Caenorhabditis elegans
Exon24215   314   I: 9102999-9103312 Caenorhabditis elegans
Exon24225   473   I: 9104049-9104521 Caenorhabditis elegans
Exon24235   97   I: 9104606-9104702 Caenorhabditis elegans
Exon24245   95   I: 9104748-9104842 Caenorhabditis elegans
Exon24255   126   I: 9104899-9105024 Caenorhabditis elegans
Exon24263   366   I: 9105695-9106060 Caenorhabditis elegans
Exon24277   30   I: 9107002-9107031 Caenorhabditis elegans
Exon24286   114   I: 9107111-9107224 Caenorhabditis elegans
Exon24296   36   I: 9107307-9107342 Caenorhabditis elegans
Exon24308   115   I: 9107468-9107582 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:W10D5.3c.1 9100846 9107582 -1

1 Sequence

Length
2715

1 Sequence Ontology Term

Identifier Name Description
transcript