WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:W10D5.3c Sequence Name  W10D5.3c
Length (nt)  2343   Chromosome Location  I: 9101175-9101233
Chromosome . Primary Identifier  I Chromosome Location . Start  9101175
Chromosome Location . End  9101233
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
W10D5.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE46906 GEI-17, isoform c 88.1 780 Caenorhabditis elegans
 

Other

42 RNAi

WormBase ID
WBRNAi00004467
WBRNAi00055085
WBRNAi00026534
WBRNAi00113441
WBRNAi00107531
WBRNAi00036429
WBRNAi00024292
WBRNAi00116827
WBRNAi00111875
WBRNAi00026535
WBRNAi00081632
WBRNAi00092040
WBRNAi00107433
WBRNAi00107317
WBRNAi00084572
WBRNAi00104153
WBRNAi00104134
WBRNAi00104136
WBRNAi00104135
WBRNAi00104138
WBRNAi00104137
WBRNAi00104140
WBRNAi00104139
WBRNAi00104142
WBRNAi00104141
WBRNAi00104144
WBRNAi00104143
WBRNAi00104146
WBRNAi00104145
WBRNAi00104148

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:W10D5.3c 9101175 9101233 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00001574 gei-17 W10D5.3 Caenorhabditis elegans

14 Locations


Feature . Primary Identifier
Start End Strand
CDS:W10D5.3c 9101175 9101233 -1
CDS:W10D5.3c 9101838 9102003 -1
CDS:W10D5.3c 9102265 9102402 -1
CDS:W10D5.3c 9102641 9102897 -1
CDS:W10D5.3c 9102999 9103312 -1
CDS:W10D5.3c 9104049 9104521 -1
CDS:W10D5.3c 9104606 9104702 -1
CDS:W10D5.3c 9104748 9104842 -1
CDS:W10D5.3c 9104899 9105024 -1
CDS:W10D5.3c 9105695 9106060 -1
CDS:W10D5.3c 9107002 9107031 -1
CDS:W10D5.3c 9107111 9107224 -1
CDS:W10D5.3c 9107307 9107342 -1
CDS:W10D5.3c 9107468 9107539 -1

1 Sequence

Length
2343

1 Sequence Ontology Term

Identifier Name Description
CDS  

3 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:W10D5.3c.3 W10D5.3c.3 3276   I: 9100843-9108140
Transcript:W10D5.3c.2 W10D5.3c.2 2700   I: 9100845-9107566
Transcript:W10D5.3c.1 W10D5.3c.1 2715   I: 9100846-9107582