WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F38E9.2 Sequence Name  F38E9.2
Length (nt)  2787   Chromosome Location  X: 16457459-16457672
Chromosome . Primary Identifier  X Chromosome Location . Start  16457459
Chromosome Location . End  16457672
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F38E9.2

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53415 NAS-39 104.1 928 Caenorhabditis elegans
 

Other

4 RNAi

WormBase ID
WBRNAi00046725
WBRNAi00014575
WBRNAi00061417
WBRNAi00089071

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F38E9.2 16457459 16457672 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00003555 nas-39 F38E9.2 Caenorhabditis elegans

22 Locations


Feature . Primary Identifier
Start End Strand
CDS:F38E9.2 16457459 16457672 1
CDS:F38E9.2 16458566 16458686 1
CDS:F38E9.2 16461174 16461352 1
CDS:F38E9.2 16461664 16461737 1
CDS:F38E9.2 16461783 16461855 1
CDS:F38E9.2 16461960 16462040 1
CDS:F38E9.2 16462088 16462201 1
CDS:F38E9.2 16463355 16463450 1
CDS:F38E9.2 16464323 16464483 1
CDS:F38E9.2 16464538 16464639 1
CDS:F38E9.2 16464708 16464862 1
CDS:F38E9.2 16465559 16465674 1
CDS:F38E9.2 16466332 16466616 1
CDS:F38E9.2 16466666 16466827 1
CDS:F38E9.2 16466880 16466978 1
CDS:F38E9.2 16467975 16468069 1
CDS:F38E9.2 16468117 16468210 1
CDS:F38E9.2 16468315 16468434 1
CDS:F38E9.2 16468516 16468604 1
CDS:F38E9.2 16470257 16470364 1
CDS:F38E9.2 16470853 16470937 1
CDS:F38E9.2 16470987 16471150 1

1 Sequence

Length
2787

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F38E9.2.1 F38E9.2.1 3102   X: 16456927-16471333
Transcript:F38E9.2.2 F38E9.2.2 3438   X: 16456991-16471333