WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F59C12.2a.1 Sequence Name  F59C12.2a.1
Length (nt)  2214   Chromosome Location  X: 16579745-16587624
Chromosome . Primary Identifier  X Chromosome Location . Start  16579745
Chromosome Location . End  16587624 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F59C12.2a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00004776 ser-1 F59C12.2 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F59C12.2a F59C12.2a 2052   X: 16579745-16579808

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F59C12.2a.1 16579745 16587624 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

6 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon264398   64   X: 16579745-16579808 Caenorhabditis elegans
Exon264399   294   X: 16581926-16582219 Caenorhabditis elegans
Exon264401   716   X: 16583045-16583760 Caenorhabditis elegans
Exon264403   341   X: 16584672-16585012 Caenorhabditis elegans
Exon264405   160   X: 16585614-16585773 Caenorhabditis elegans
Exon264408   639   X: 16586986-16587624 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F59C12.2a.1 16579745 16587624 1

1 Sequence

Length
2214

1 Sequence Ontology Term

Identifier Name Description
transcript