WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F25H5.1i.1 Sequence Name  F25H5.1i.1
Length (nt)  3183   Chromosome Location  I: 9181821-9220728
Chromosome . Primary Identifier  I Chromosome Location . Start  9181821
Chromosome Location . End  9220728 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.1i.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006407 lim-9 F25H5.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F25H5.1i F25H5.1i 2382   I: 9182622-9182648

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.1i.1 9181821 9220728 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

18 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon24503   828   I: 9181821-9182648 Caenorhabditis elegans
Exon24512   143   I: 9182704-9182846 Caenorhabditis elegans
Exon24520   357   I: 9183147-9183503 Caenorhabditis elegans
Exon24527   72   I: 9183832-9183903 Caenorhabditis elegans
Exon24534   103   I: 9184251-9184353 Caenorhabditis elegans
Exon24541   201   I: 9184866-9185066 Caenorhabditis elegans
Exon24547   99   I: 9191557-9191655 Caenorhabditis elegans
Exon24553   117   I: 9192038-9192154 Caenorhabditis elegans
Exon24559   237   I: 9192368-9192604 Caenorhabditis elegans
Exon24565   95   I: 9194413-9194507 Caenorhabditis elegans
Exon24570   98   I: 9195027-9195124 Caenorhabditis elegans
Exon24576   146   I: 9205587-9205732 Caenorhabditis elegans
Exon24579   60   I: 9209390-9209449 Caenorhabditis elegans
Exon24582   105   I: 9209853-9209957 Caenorhabditis elegans
Exon24585   111   I: 9210227-9210337 Caenorhabditis elegans
Exon24587   216   I: 9218496-9218711 Caenorhabditis elegans
Exon24589   124   I: 9218925-9219048 Caenorhabditis elegans
Exon24590   71   I: 9220658-9220728 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:F25H5.1i.1 9181821 9220728 -1

1 Sequence

Length
3183

1 Sequence Ontology Term

Identifier Name Description
transcript