WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F25H5.1i Sequence Name  F25H5.1i
Length (nt)  2382   Chromosome Location  I: 9182622-9182648
Chromosome . Primary Identifier  I Chromosome Location . Start  9182622
Chromosome Location . End  9182648
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F25H5.1i

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE50349 LIM-9, isoform i 89.4 793 Caenorhabditis elegans
 

Other

14 RNAi

WormBase ID
WBRNAi00042533
WBRNAi00042535
WBRNAi00045546
WBRNAi00003160
WBRNAi00003162
WBRNAi00003463
WBRNAi00109567
WBRNAi00107936
WBRNAi00109178
WBRNAi00109276
WBRNAi00092867
WBRNAi00081080
WBRNAi00109470
WBRNAi00109373

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F25H5.1i 9182622 9182648 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006407 lim-9 F25H5.1 Caenorhabditis elegans

18 Locations


Feature . Primary Identifier
Start End Strand
CDS:F25H5.1i 9182622 9182648 -1
CDS:F25H5.1i 9182704 9182846 -1
CDS:F25H5.1i 9183147 9183503 -1
CDS:F25H5.1i 9183832 9183903 -1
CDS:F25H5.1i 9184251 9184353 -1
CDS:F25H5.1i 9184866 9185066 -1
CDS:F25H5.1i 9191557 9191655 -1
CDS:F25H5.1i 9192038 9192154 -1
CDS:F25H5.1i 9192368 9192604 -1
CDS:F25H5.1i 9194413 9194507 -1
CDS:F25H5.1i 9195027 9195124 -1
CDS:F25H5.1i 9205587 9205732 -1
CDS:F25H5.1i 9209390 9209449 -1
CDS:F25H5.1i 9209853 9209957 -1
CDS:F25H5.1i 9210227 9210337 -1
CDS:F25H5.1i 9218496 9218711 -1
CDS:F25H5.1i 9218925 9219048 -1
CDS:F25H5.1i 9220658 9220728 -1

1 Sequence

Length
2382

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F25H5.1i.1 F25H5.1i.1 3183   I: 9181821-9220728