WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:F41G4.3a Sequence Name  F41G4.3a
Length (nt)  990   Chromosome Location  X: 16816421-16816496
Chromosome . Primary Identifier  X Chromosome Location . Start  16816421
Chromosome Location . End  16816496
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F41G4.3a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE52942 STO-5, isoform a 37.4 329 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00001282
WBRNAi00047028
WBRNAi00014774

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:F41G4.3a 16816421 16816496 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006067 sto-5 F41G4.3 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:F41G4.3a 16816421 16816496 -1
CDS:F41G4.3a 16816905 16816997 -1
CDS:F41G4.3a 16817048 16817226 -1
CDS:F41G4.3a 16817450 16817792 -1
CDS:F41G4.3a 16817848 16817948 -1
CDS:F41G4.3a 16818291 16818371 -1
CDS:F41G4.3a 16824035 16824092 -1
CDS:F41G4.3a 16824728 16824786 -1

1 Sequence

Length
990

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:F41G4.3a.1 F41G4.3a.1 1823   X: 16816260-16825458