WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30G4.4a.1 Sequence Name  C30G4.4a.1
Length (nt)  1280   Chromosome Location  X: 17056924-17072188
Chromosome . Primary Identifier  X Chromosome Location . Start  17056924
Chromosome Location . End  17072188 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30G4.4a.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016269 C30G4.4 C30G4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30G4.4a C30G4.4a 1035   X: 17057163-17057238

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30G4.4a.1 17056924 17072188 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

13 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265332   315   X: 17056924-17057238 Caenorhabditis elegans
Exon265351   92   X: 17057288-17057379 Caenorhabditis elegans
Exon265371   64   X: 17058183-17058246 Caenorhabditis elegans
Exon265389   27   X: 17059198-17059224 Caenorhabditis elegans
Exon265400   76   X: 17059318-17059393 Caenorhabditis elegans
Exon265416   61   X: 17059649-17059709 Caenorhabditis elegans
Exon265433   119   X: 17065124-17065242 Caenorhabditis elegans
Exon265449   62   X: 17066012-17066073 Caenorhabditis elegans
Exon265465   20   X: 17066122-17066141 Caenorhabditis elegans
Exon265481   78   X: 17066476-17066553 Caenorhabditis elegans
Exon265497   161   X: 17066688-17066848 Caenorhabditis elegans
Exon265505   130   X: 17071941-17072070 Caenorhabditis elegans
Exon265520   75   X: 17072114-17072188 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30G4.4a.1 17056924 17072188 -1

1 Sequence

Length
1280

1 Sequence Ontology Term

Identifier Name Description
transcript