WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C30G4.4e.1 Sequence Name  C30G4.4e.1
Length (nt)  1245   Chromosome Location  X: 17056926-17072182
Chromosome . Primary Identifier  X Chromosome Location . Start  17056926
Chromosome Location . End  17072182 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C30G4.4e.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00016269 C30G4.4 C30G4.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C30G4.4e C30G4.4e 1008   X: 17057163-17057238

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C30G4.4e.1 17056926 17072182 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

12 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265333   313   X: 17056926-17057238 Caenorhabditis elegans
Exon265355   92   X: 17057288-17057379 Caenorhabditis elegans
Exon265375   64   X: 17058183-17058246 Caenorhabditis elegans
Exon265404   76   X: 17059318-17059393 Caenorhabditis elegans
Exon265420   61   X: 17059649-17059709 Caenorhabditis elegans
Exon265435   119   X: 17065124-17065242 Caenorhabditis elegans
Exon265453   62   X: 17066012-17066073 Caenorhabditis elegans
Exon265469   20   X: 17066122-17066141 Caenorhabditis elegans
Exon265483   78   X: 17066476-17066553 Caenorhabditis elegans
Exon265501   161   X: 17066688-17066848 Caenorhabditis elegans
Exon265509   130   X: 17071941-17072070 Caenorhabditis elegans
Exon265516   69   X: 17072114-17072182 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C30G4.4e.1 17056926 17072182 -1

1 Sequence

Length
1245

1 Sequence Ontology Term

Identifier Name Description
transcript