WormMine

WS295

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:T25G12.6.1 Sequence Name  T25G12.6.1
Length (nt)  2831   Chromosome Location  X: 17225197-17230208
Chromosome . Primary Identifier  X Chromosome Location . Start  17225197
Chromosome Location . End  17230208 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
T25G12.6.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00020813 T25G12.6 T25G12.6 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:T25G12.6 T25G12.6 2634   X: 17225235-17225366

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:T25G12.6.1 17225197 17230208 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265660   170   X: 17225197-17225366 Caenorhabditis elegans
Exon265661   61   X: 17225410-17225470 Caenorhabditis elegans
Exon265662   81   X: 17225519-17225599 Caenorhabditis elegans
Exon265663   84   X: 17225841-17225924 Caenorhabditis elegans
Exon265664   113   X: 17225970-17226082 Caenorhabditis elegans
Exon265665   74   X: 17226132-17226205 Caenorhabditis elegans
Exon265666   145   X: 17226249-17226393 Caenorhabditis elegans
Exon265667   157   X: 17226533-17226689 Caenorhabditis elegans
Exon265668   200   X: 17226908-17227107 Caenorhabditis elegans
Exon265669   84   X: 17227156-17227239 Caenorhabditis elegans
Exon265670   94   X: 17227288-17227381 Caenorhabditis elegans
Exon265671   228   X: 17227430-17227657 Caenorhabditis elegans
Exon265672   75   X: 17227706-17227780 Caenorhabditis elegans
Exon265673   107   X: 17228041-17228147 Caenorhabditis elegans
Exon265674   87   X: 17228200-17228286 Caenorhabditis elegans
Exon265675   374   X: 17228331-17228704 Caenorhabditis elegans
Exon265676   137   X: 17228766-17228902 Caenorhabditis elegans
Exon265677   71   X: 17229019-17229089 Caenorhabditis elegans
Exon265678   113   X: 17229223-17229335 Caenorhabditis elegans
Exon265679   149   X: 17229789-17229937 Caenorhabditis elegans
Exon265680   227   X: 17229982-17230208 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:T25G12.6.1 17225197 17230208 -1

1 Sequence

Length
2831

1 Sequence Ontology Term

Identifier Name Description
transcript