WormMine

WS297

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:F11C7.4.1 Sequence Name  F11C7.4.1
Length (nt)  5606   Chromosome Location  X: 17402532-17414014
Chromosome . Primary Identifier  X Chromosome Location . Start  17402532
Chromosome Location . End  17414014 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
F11C7.4.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000792 crb-1 F11C7.4 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:F11C7.4 F11C7.4 5169   X: 17402804-17402848

1 Chromosome

WormBase ID Organism Length (nt)
X Caenorhabditis elegans 17718942  

1 Chromosome Location


Feature . Primary Identifier 		Start End Strand
Transcript:F11C7.4.1 17402532 17414014 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon265978   317   X: 17402532-17402848 Caenorhabditis elegans
Exon265979   174   X: 17403461-17403634 Caenorhabditis elegans
Exon265980   78   X: 17403968-17404045 Caenorhabditis elegans
Exon265981   113   X: 17404123-17404235 Caenorhabditis elegans
Exon265982   105   X: 17404878-17404982 Caenorhabditis elegans
Exon265983   217   X: 17405062-17405278 Caenorhabditis elegans
Exon265984   507   X: 17405331-17405837 Caenorhabditis elegans
Exon265985   345   X: 17406746-17407090 Caenorhabditis elegans
Exon265986   87   X: 17407138-17407224 Caenorhabditis elegans
Exon265987   191   X: 17407295-17407485 Caenorhabditis elegans
Exon265988   169   X: 17407530-17407698 Caenorhabditis elegans
Exon265989   131   X: 17407746-17407876 Caenorhabditis elegans
Exon265990   190   X: 17407936-17408125 Caenorhabditis elegans
Exon265991   234   X: 17408406-17408639 Caenorhabditis elegans
Exon265992   110   X: 17408685-17408794 Caenorhabditis elegans
Exon265993   164   X: 17409383-17409546 Caenorhabditis elegans
Exon265994   130   X: 17409663-17409792 Caenorhabditis elegans
Exon265995   151   X: 17409837-17409987 Caenorhabditis elegans
Exon265996   96   X: 17410035-17410130 Caenorhabditis elegans
Exon265997   232   X: 17410181-17410412 Caenorhabditis elegans
Exon265998   182   X: 17410461-17410642 Caenorhabditis elegans
Exon265999   114   X: 17410918-17411031 Caenorhabditis elegans
Exon266000   140   X: 17411099-17411238 Caenorhabditis elegans
Exon266001   442   X: 17411329-17411770 Caenorhabditis elegans
Exon266002   96   X: 17411840-17411935 Caenorhabditis elegans
Exon266003   143   X: 17411981-17412123 Caenorhabditis elegans
Exon266004   151   X: 17412623-17412773 Caenorhabditis elegans
Exon266005   100   X: 17412820-17412919 Caenorhabditis elegans
Exon266006   286   X: 17412966-17413251 Caenorhabditis elegans
Exon266008   211   X: 17413804-17414014 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier 		Start End Strand
Transcript:F11C7.4.1 17402532 17414014 -1

1 Sequence

Length
5606

1 Sequence Ontology Term

Identifier Name Description
transcript