WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:C16C2.1.1 Sequence Name  C16C2.1.1
Length (nt)  600   Chromosome Location  I: 9727169-9728034
Chromosome . Primary Identifier  I Chromosome Location . Start  9727169
Chromosome Location . End  9728034 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
C16C2.1.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000430 ceh-5 C16C2.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:C16C2.1 C16C2.1 405   I: 9727217-9727360

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:C16C2.1.1 9727169 9728034 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

3 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon26231   192   I: 9727169-9727360 Caenorhabditis elegans
Exon26232   143   I: 9727583-9727725 Caenorhabditis elegans
Exon26233   265   I: 9727770-9728034 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:C16C2.1.1 9727169 9728034 1

1 Sequence

Length
600

1 Sequence Ontology Term

Identifier Name Description
transcript