WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53H1C.1a Sequence Name  Y53H1C.1a
Length (nt)  1626   Chromosome Location  I: 11389141-11389238
Chromosome . Primary Identifier  I Chromosome Location . Start  11389141
Chromosome Location . End  11389238
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53H1C.1a

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22438 AAT-9, isoform a 59.5 541 Caenorhabditis elegans
 

Other

2 RNAi

WormBase ID
WBRNAi00004721
WBRNAi00037450

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53H1C.1a 11389141 11389238 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00000010 aat-9 Y53H1C.1 Caenorhabditis elegans

12 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53H1C.1a 11389141 11389238 -1
CDS:Y53H1C.1a 11389875 11390003 -1
CDS:Y53H1C.1a 11390089 11390188 -1
CDS:Y53H1C.1a 11390948 11391134 -1
CDS:Y53H1C.1a 11392048 11392185 -1
CDS:Y53H1C.1a 11393292 11393519 -1
CDS:Y53H1C.1a 11393722 11393875 -1
CDS:Y53H1C.1a 11394747 11394878 -1
CDS:Y53H1C.1a 11394927 11395007 -1
CDS:Y53H1C.1a 11395069 11395177 -1
CDS:Y53H1C.1a 11396254 11396432 -1
CDS:Y53H1C.1a 11396568 11396658 -1

1 Sequence

Length
1626

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53H1C.1a.1 Y53H1C.1a.1 2087   I: 11388682-11396660