WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1151.1j.1 Sequence Name  ZK1151.1j.1
Length (nt)  15137   Chromosome Location  I: 11747424-11792066
Chromosome . Primary Identifier  I Chromosome Location . Start  11747424
Chromosome Location . End  11792066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1j.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1j ZK1151.1j 14799   I: 11747762-11747801

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1j.1 11747424 11792066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

29 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30728   378   I: 11747424-11747801 Caenorhabditis elegans
Exon30736   204   I: 11747897-11748100 Caenorhabditis elegans
Exon30743   338   I: 11748176-11748513 Caenorhabditis elegans
Exon30750   120   I: 11748569-11748688 Caenorhabditis elegans
Exon30757   113   I: 11748745-11748857 Caenorhabditis elegans
Exon30765   1701   I: 11749275-11750975 Caenorhabditis elegans
Exon30772   902   I: 11751032-11751933 Caenorhabditis elegans
Exon30779   3158   I: 11751993-11755150 Caenorhabditis elegans
Exon30786   464   I: 11756603-11757066 Caenorhabditis elegans
Exon30793   1043   I: 11757126-11758168 Caenorhabditis elegans
Exon30800   1460   I: 11758224-11759683 Caenorhabditis elegans
Exon30808   862   I: 11759733-11760594 Caenorhabditis elegans
Exon30814   188   I: 11761820-11762007 Caenorhabditis elegans
Exon30821   150   I: 11762100-11762249 Caenorhabditis elegans
Exon30844   96   I: 11773418-11773513 Caenorhabditis elegans
Exon30857   463   I: 11774150-11774612 Caenorhabditis elegans
Exon30869   86   I: 11774706-11774791 Caenorhabditis elegans
Exon30881   153   I: 11774872-11775024 Caenorhabditis elegans
Exon30893   511   I: 11775073-11775583 Caenorhabditis elegans
Exon30905   1529   I: 11775642-11777170 Caenorhabditis elegans
Exon30916   339   I: 11777360-11777698 Caenorhabditis elegans
Exon30926   189   I: 11777952-11778140 Caenorhabditis elegans
Exon30938   117   I: 11779553-11779669 Caenorhabditis elegans
Exon30950   63   I: 11780571-11780633 Caenorhabditis elegans
Exon30964   177   I: 11787762-11787938 Caenorhabditis elegans
Exon30973   78   I: 11788650-11788727 Caenorhabditis elegans
Exon30982   90   I: 11788797-11788886 Caenorhabditis elegans
Exon30991   62   I: 11789181-11789242 Caenorhabditis elegans
Exon30996   103   I: 11791964-11792066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1j.1 11747424 11792066 -1

1 Sequence

Length
15137

1 Sequence Ontology Term

Identifier Name Description
transcript