WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1151.1c.1 Sequence Name  ZK1151.1c.1
Length (nt)  15218   Chromosome Location  I: 11747428-11792118
Chromosome . Primary Identifier  I Chromosome Location . Start  11747428
Chromosome Location . End  11792118 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1c.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1c ZK1151.1c 14832   I: 11747762-11747801

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1c.1 11747428 11792118 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

30 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30729   374   I: 11747428-11747801 Caenorhabditis elegans
Exon30735   204   I: 11747897-11748100 Caenorhabditis elegans
Exon30742   338   I: 11748176-11748513 Caenorhabditis elegans
Exon30749   120   I: 11748569-11748688 Caenorhabditis elegans
Exon30756   113   I: 11748745-11748857 Caenorhabditis elegans
Exon30763   33   I: 11749129-11749161 Caenorhabditis elegans
Exon30764   1701   I: 11749275-11750975 Caenorhabditis elegans
Exon30771   902   I: 11751032-11751933 Caenorhabditis elegans
Exon30778   3158   I: 11751993-11755150 Caenorhabditis elegans
Exon30785   464   I: 11756603-11757066 Caenorhabditis elegans
Exon30792   1043   I: 11757126-11758168 Caenorhabditis elegans
Exon30799   1460   I: 11758224-11759683 Caenorhabditis elegans
Exon30807   862   I: 11759733-11760594 Caenorhabditis elegans
Exon30813   188   I: 11761820-11762007 Caenorhabditis elegans
Exon30820   150   I: 11762100-11762249 Caenorhabditis elegans
Exon30839   96   I: 11773418-11773513 Caenorhabditis elegans
Exon30851   463   I: 11774150-11774612 Caenorhabditis elegans
Exon30863   86   I: 11774706-11774791 Caenorhabditis elegans
Exon30875   153   I: 11774872-11775024 Caenorhabditis elegans
Exon30887   511   I: 11775073-11775583 Caenorhabditis elegans
Exon30899   1529   I: 11775642-11777170 Caenorhabditis elegans
Exon30911   339   I: 11777360-11777698 Caenorhabditis elegans
Exon30920   189   I: 11777952-11778140 Caenorhabditis elegans
Exon30932   117   I: 11779553-11779669 Caenorhabditis elegans
Exon30944   63   I: 11780571-11780633 Caenorhabditis elegans
Exon30960   177   I: 11787762-11787938 Caenorhabditis elegans
Exon30968   78   I: 11788650-11788727 Caenorhabditis elegans
Exon30977   90   I: 11788797-11788886 Caenorhabditis elegans
Exon30986   62   I: 11789181-11789242 Caenorhabditis elegans
Exon30998   155   I: 11791964-11792118 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1c.1 11747428 11792118 -1

1 Sequence

Length
15218

1 Sequence Ontology Term

Identifier Name Description
transcript