WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:ZK1151.1k.1 Sequence Name  ZK1151.1k.1
Length (nt)  14460   Chromosome Location  I: 11747762-11792066
Chromosome . Primary Identifier  I Chromosome Location . Start  11747762
Chromosome Location . End  11792066 Method  Coding_transcript
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
ZK1151.1k.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00006876 vab-10 ZK1151.1 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:ZK1151.1k ZK1151.1k 14460   I: 11747762-11747801

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1k.1 11747762 11792066 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

28 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon30734   40   I: 11747762-11747801 Caenorhabditis elegans
Exon30737   204   I: 11747897-11748100 Caenorhabditis elegans
Exon30744   338   I: 11748176-11748513 Caenorhabditis elegans
Exon30751   120   I: 11748569-11748688 Caenorhabditis elegans
Exon30758   113   I: 11748745-11748857 Caenorhabditis elegans
Exon30766   1701   I: 11749275-11750975 Caenorhabditis elegans
Exon30773   902   I: 11751032-11751933 Caenorhabditis elegans
Exon30780   3158   I: 11751993-11755150 Caenorhabditis elegans
Exon30787   464   I: 11756603-11757066 Caenorhabditis elegans
Exon30794   1043   I: 11757126-11758168 Caenorhabditis elegans
Exon30801   1460   I: 11758224-11759683 Caenorhabditis elegans
Exon30809   862   I: 11759733-11760594 Caenorhabditis elegans
Exon30815   188   I: 11761820-11762007 Caenorhabditis elegans
Exon30822   150   I: 11762100-11762249 Caenorhabditis elegans
Exon30845   96   I: 11773418-11773513 Caenorhabditis elegans
Exon30858   463   I: 11774150-11774612 Caenorhabditis elegans
Exon30870   86   I: 11774706-11774791 Caenorhabditis elegans
Exon30882   153   I: 11774872-11775024 Caenorhabditis elegans
Exon30894   511   I: 11775073-11775583 Caenorhabditis elegans
Exon30906   1529   I: 11775642-11777170 Caenorhabditis elegans
Exon30927   189   I: 11777952-11778140 Caenorhabditis elegans
Exon30939   117   I: 11779553-11779669 Caenorhabditis elegans
Exon30951   63   I: 11780571-11780633 Caenorhabditis elegans
Exon30965   177   I: 11787762-11787938 Caenorhabditis elegans
Exon30974   78   I: 11788650-11788727 Caenorhabditis elegans
Exon30983   90   I: 11788797-11788886 Caenorhabditis elegans
Exon30992   62   I: 11789181-11789242 Caenorhabditis elegans
Exon30997   103   I: 11791964-11792066 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:ZK1151.1k.1 11747762 11792066 -1

1 Sequence

Length
14460

1 Sequence Ontology Term

Identifier Name Description
transcript