WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y53C10A.12 Sequence Name  Y53C10A.12
Length (nt)  2016   Chromosome Location  I: 11953797-11953889
Chromosome . Primary Identifier  I Chromosome Location . Start  11953797
Chromosome Location . End  11953889
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y53C10A.12

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE22380 HSF-1 75.0 671 Caenorhabditis elegans
 

Other

117 RNAi

WormBase ID
WBRNAi00084937
WBRNAi00084943
WBRNAi00084555
WBRNAi00070400
WBRNAi00067333
WBRNAi00067363
WBRNAi00067553
WBRNAi00067882
WBRNAi00067999
WBRNAi00057239
WBRNAi00026806
WBRNAi00026807
WBRNAi00078327
WBRNAi00063650
WBRNAi00078303
WBRNAi00068415
WBRNAi00068417
WBRNAi00068416
WBRNAi00068418
WBRNAi00068883
WBRNAi00068884
WBRNAi00004706
WBRNAi00097032
WBRNAi00076810
WBRNAi00093191
WBRNAi00093188
WBRNAi00071065
WBRNAi00093223
WBRNAi00093220
WBRNAi00093219

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y53C10A.12 11953797 11953889 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00002004 hsf-1 Y53C10A.12 Caenorhabditis elegans

8 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y53C10A.12 11953797 11953889 -1
CDS:Y53C10A.12 11955323 11955805 -1
CDS:Y53C10A.12 11956675 11957263 -1
CDS:Y53C10A.12 11958236 11958370 -1
CDS:Y53C10A.12 11958767 11958900 -1
CDS:Y53C10A.12 11959111 11959244 -1
CDS:Y53C10A.12 11959917 11960136 -1
CDS:Y53C10A.12 11961735 11961962 -1

1 Sequence

Length
2016

1 Sequence Ontology Term

Identifier Name Description
CDS  

2 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y53C10A.12.2 Y53C10A.12.2 2478   I: 11953507-11963085
Transcript:Y53C10A.12.1 Y53C10A.12.1 2326   I: 11953509-11961984