WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

CDS :

WormMine ID  CDS:Y40B1A.3c Sequence Name  Y40B1A.3c
Length (nt)  1548   Chromosome Location  I: 13347080-13347166
Chromosome . Primary Identifier  I Chromosome Location . Start  13347080
Chromosome Location . End  13347166
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1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y40B1A.3c

Proteins

1 Protein

WormBase ID Name Molecular Weight (kDa) Length Organism
CE53974 WAC-1.1, isoform c 55.7 515 Caenorhabditis elegans
 

Other

3 RNAi

WormBase ID
WBRNAi00056316
WBRNAi00004606
WBRNAi00036973

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
CDS:Y40B1A.3c 13347080 13347166 1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans CDS sequence (Fasta)  

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00012734 wac-1.1 Y40B1A.3 Caenorhabditis elegans

10 Locations


Feature . Primary Identifier
Start End Strand
CDS:Y40B1A.3c 13347080 13347166 1
CDS:Y40B1A.3c 13347520 13347618 1
CDS:Y40B1A.3c 13353007 13353245 1
CDS:Y40B1A.3c 13354060 13354225 1
CDS:Y40B1A.3c 13354277 13354479 1
CDS:Y40B1A.3c 13355612 13355794 1
CDS:Y40B1A.3c 13356474 13356607 1
CDS:Y40B1A.3c 13356736 13356908 1
CDS:Y40B1A.3c 13357727 13357864 1
CDS:Y40B1A.3c 13358549 13358674 1

1 Sequence

Length
1548

1 Sequence Ontology Term

Identifier Name Description
CDS  

1 Transcripts

WormMine ID Sequence Name Length (nt) Chromosome Location
Transcript:Y40B1A.3c.1 Y40B1A.3c.1 1856   I: 13347066-13358968