WormMine

WS294

Intermine data mining platform for C. elegans and related nematodes

mRNA :

WormMine ID  Transcript:Y105E8A.25g.1 Sequence Name  Y105E8A.25g.1
Length (nt)  4417   Chromosome Location  I: 14567368-14604138
Chromosome . Primary Identifier  I Chromosome Location . Start  14567368
Chromosome Location . End  14604138 Method  Coding_transcript
Quick Links:
 
Quick Links:
 

1 Organism

Name Taxon Id
Caenorhabditis elegans 6239

1 Synonyms

Value
Y105E8A.25g.1

Genomics

1 Gene

WormBase Gene ID Gene Name Sequence Name Organism
WBGene00013682 rhgf-3 Y105E8A.25 Caenorhabditis elegans
 

Other

1 CDSs

WormMine ID Sequence Name Length (nt) Chromosome Location
CDS:Y105E8A.25g Y105E8A.25g 4221   I: 14567368-14567497

1 Chromosome

WormBase ID Organism Length (nt)
I Caenorhabditis elegans 15072434  

1 Chromosome Location


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.25g.1 14567368 14604138 -1

3 Data Sets

Name URL
WormBaseAcedbConverter  
C. elegans genomic annotations (GFF3 Gene)  
WormBase C. elegans transcript sequence (Fasta)  

21 Exons

WormBase ID Name Sequence Name Length (nt) Chromosome Location Organism
Exon35998   130   I: 14567368-14567497 Caenorhabditis elegans
Exon36006   312   I: 14570053-14570364 Caenorhabditis elegans
Exon36012   340   I: 14571439-14571778 Caenorhabditis elegans
Exon36020   222   I: 14572719-14572940 Caenorhabditis elegans
Exon36027   192   I: 14575108-14575299 Caenorhabditis elegans
Exon36034   499   I: 14576119-14576617 Caenorhabditis elegans
Exon36041   689   I: 14577880-14578568 Caenorhabditis elegans
Exon36049   119   I: 14579082-14579200 Caenorhabditis elegans
Exon36056   112   I: 14579463-14579574 Caenorhabditis elegans
Exon36063   91   I: 14585522-14585612 Caenorhabditis elegans
Exon36068   105   I: 14586781-14586885 Caenorhabditis elegans
Exon36073   73   I: 14587067-14587139 Caenorhabditis elegans
Exon36081   107   I: 14590706-14590812 Caenorhabditis elegans
Exon36086   158   I: 14592095-14592252 Caenorhabditis elegans
Exon36090   244   I: 14593328-14593571 Caenorhabditis elegans
Exon36093   353   I: 14595998-14596350 Caenorhabditis elegans
Exon36096   97   I: 14600191-14600287 Caenorhabditis elegans
Exon36099   141   I: 14602064-14602204 Caenorhabditis elegans
Exon36102   71   I: 14602262-14602332 Caenorhabditis elegans
Exon36105   213   I: 14602593-14602805 Caenorhabditis elegans
Exon36108   149   I: 14603990-14604138 Caenorhabditis elegans

1 Locations


Feature . Primary Identifier
Start End Strand
Transcript:Y105E8A.25g.1 14567368 14604138 -1

1 Sequence

Length
4417

1 Sequence Ontology Term

Identifier Name Description
transcript